Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868999.1_cds_XP_016433633.1_29771
CDS Infomation

[gene=LOC107760131] [db_xref=GeneID:107760131] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016433633.1] [location=35845..37338] [gbkey=CDS]
Sequence

ATGGATAAACAACCTGCTAGAGAAGAAGGTTGGAACGTCGGTAGTGAAAAGTTTGCTGAT
ATTAATCCAGAAGAATGGAGCATTACACTCCATCAAGAATCATACTCAAATTCTCATGAA
ATCAGTGAAAAGGAGAGAAAATGGCTATCTTCTGTGGAGAATTACCCTGCCATTGGCTCA
TCTGAGAAGCCAAAGATACAGATGGTCCCCAAAATGCAACGGGAGAGTGAATCAAATATT
AGGTGCTATGAGCCCCTCGTGGTTGCTCTCGGTCCATTTCACCACGGAAAATCCAAGCTT
CAACCTATGGAAAAGTACAAGGTGTTACTGGCAAATCAGTTTGCTAAAGAAAGTAGCAAA
GCAAAATCAGTATCTATTGATGCGCTTTACACAAGGGTCAAGGACATTGTGCCCAGTGCT
AGGGACTGCTATGCTGAGGACATCACTAAATATTACAGCGACGTGGAGTTTGCAAAGATG
ATGTTCTTGGATGGCTGTTTCATTCTCCAATATATTTACTGCCTTGTCAATAGCAAAAGC
TATAAGCAGCTGCAGATGAAGAGCCATGATATAGCTTTCATTCGTCGTGATCTTTTCTTA
CTTGAAAATCAGTTACCTTTTGAAGTCCTGCATGTGTTAATGAGCTGTAGATTCAAGAAA
GATGAAGGAATGAGGATGATTAAAACATTCATCTTGAGTGCACATGCAAAGCCTGATCTT
CAAAACCATGGAATAATTCAAAGTGTCAAGTATTTATTTCTTGATTTCTTTGGCAAGAAT
TCTGAAGAAGAAGAGCCTTCCCTTACCCAAGAAGAAAGCTCAAAAAATGATCAGTTACCT
GCTCATCTGCTCGAGATATTAAGAACACAACTCATAGACCCGAATGCTTTCTCTGGAGGC
GGATGCTATCTAAGGGGTGAGTGGTGCTCGTATCGTTCAGCCAGCGAGCTGAGTAGAGCA
GGAATCCATTTCGAGTGTGGAAAGAAACGTTGTCTTTCAGATATTAAGTTCAATTCATTC
CGTTTCTCAGCTCTTTTAACACTTCCACCTATAACTATAGATGATTCAACCAAGTCGGAG
CTATTAAACTTGGTTGCATATGAGGCATGCCCAGATACACCAGATGACTTTGGTGTTACA
TCTTATCTTTGTATGATGGATTCACTAATTGATCATGCTGAAGATGTGAAGGAGCTGAGA
TCAAAAGGTATACTACTTAACTTTCTTGGAAGTGATCAAGAAGTAGCAAATCTCTTCAAT
GAGATAGCAACAGATTTGGTGCCAAATCCTCATGCCTTTATTGATGTGAAACACAAAATT
GAGAATCATTACAATGACAAAGGCAAAGTATGGGTTGCTGAGTGGAAGAACACTCATTTT
GATAGCCCATGGACTGTTGTTGCATTTATTGCAGCAATTTTTCTCATTCTTTTACAAGTG
GCTGATACAGTTCTAGCAGGTTTCCAGGTCAAATTTGCAGAACCACCAAATTAA

Peptide Sequence

PEP ID

XP_016433633.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MDKQPAREEGWNVGSEKFADINPEEWSITLHQESYSNSHEISEKERKWLSSVENYPAIGS
SEKPKIQMVPKMQRESESNIRCYEPLVVALGPFHHGKSKLQPMEKYKVLLANQFAKESSK
AKSVSIDALYTRVKDIVPSARDCYAEDITKYYSDVEFAKMMFLDGCFILQYIYCLVNSKS
YKQLQMKSHDIAFIRRDLFLLENQLPFEVLHVLMSCRFKKDEGMRMIKTFILSAHAKPDL
QNHGIIQSVKYLFLDFFGKNSEEEEPSLTQEESSKNDQLPAHLLEILRTQLIDPNAFSGG
GCYLRGEWCSYRSASELSRAGIHFECGKKRCLSDIKFNSFRFSALLTLPPITIDDSTKSE
LLNLVAYEACPDTPDDFGVTSYLCMMDSLIDHAEDVKELRSKGILLNFLGSDQEVANLFN
EIATDLVPNPHAFIDVKHKIENHYNDKGKVWVAEWKNTHFDSPWTVVAFIAAIFLILLQV
ADTVLAGFQVKFAEPPN

Transcript Sequence

Gene sequence data has not been registered.